Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Gm42545-201ENSMUST00000202755 922 ntBASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col13a1Q9R1N9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Gm18959-201ENSMUST00000208954 655 ntBASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col13a1Q9R1N9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Gm3375-201ENSMUST00000203929 796 ntBASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Timm23-208ENSMUST00000226683 750 ntBASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Odf3b-204ENSMUST00000227834 930 ntBASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col13a1Q9R1N9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Col13a1Q9R1N9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Gm18025-201ENSMUST00000221733 862 ntBASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col13a1Q9R1N9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms