Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cdh17Q9R100 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh17Q9R100 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh17Q9R100 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.43■□□□□ 0.38
Cdh17Q9R100 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh17Q9R100 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.42■□□□□ 0.38
Cdh17Q9R100 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh17Q9R100 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh17Q9R100 Gm10849-201ENSMUST00000100397 618 ntBASIC17.42■□□□□ 0.38
Cdh17Q9R100 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh17Q9R100 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.42■□□□□ 0.38
Cdh17Q9R100 Gm6365-201ENSMUST00000054711 744 ntBASIC17.42■□□□□ 0.38
Cdh17Q9R100 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cdh17Q9R100 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh17Q9R100 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh17Q9R100 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Gm26571-201ENSMUST00000181399 666 ntBASIC17.4■□□□□ 0.38
Cdh17Q9R100 Gm7291-201ENSMUST00000199147 382 ntBASIC17.4■□□□□ 0.38
Cdh17Q9R100 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh17Q9R100 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Cdh17Q9R100 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Gm6211-202ENSMUST00000167849 925 ntBASIC17.39■□□□□ 0.37
Cdh17Q9R100 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.39■□□□□ 0.37
Cdh17Q9R100 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh17Q9R100 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh17Q9R100 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gm7290-201ENSMUST00000104990 617 ntBASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gm12918-201ENSMUST00000120234 636 ntBASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gm15710-201ENSMUST00000121821 636 ntBASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gm18284-201ENSMUST00000172604 624 ntBASIC17.37■□□□□ 0.37
Cdh17Q9R100 Gm5075-201ENSMUST00000196916 622 ntBASIC17.37■□□□□ 0.37
Cdh17Q9R100 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.37■□□□□ 0.37
Cdh17Q9R100 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.37■□□□□ 0.37
Cdh17Q9R100 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh17Q9R100 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms