Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.59■□□□□ 0.25
Cdc40Q9DC48 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.58■□□□□ 0.25
Cdc40Q9DC48 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdc40Q9DC48 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdc40Q9DC48 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdc40Q9DC48 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
Cdc40Q9DC48 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdc40Q9DC48 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Mir7071-201ENSMUST00000184847 69 ntBASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Gm44549-201ENSMUST00000208351 577 ntBASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdc40Q9DC48 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdc40Q9DC48 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Gm22325-201ENSMUST00000158904 308 ntBASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Mir6982-201ENSMUST00000184354 68 ntBASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdc40Q9DC48 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Gm2399-201ENSMUST00000104944 225 ntBASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdc40Q9DC48 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms