Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mbd3l1Q9D9H3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mbd3l1Q9D9H3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Gm9806-201ENSMUST00000051080 552 ntBASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Mbd3l1Q9D9H3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Tgds-204ENSMUST00000228543 1594 ntBASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Mbd3l1Q9D9H3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mbd3l1Q9D9H3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mbd3l1Q9D9H3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.46■□□□□ 0.06
Mbd3l1Q9D9H3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mbd3l1Q9D9H3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mbd3l1Q9D9H3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Mbd3l1Q9D9H3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mbd3l1Q9D9H3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mbd3l1Q9D9H3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mbd3l1Q9D9H3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mbd3l1Q9D9H3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms