Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Gtf3c6Q9D8P7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gtf3c6Q9D8P7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gtf3c6Q9D8P7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gtf3c6Q9D8P7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf3c6Q9D8P7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.02■□□□□ 0.63
Gtf3c6Q9D8P7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gtf3c6Q9D8P7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gtf3c6Q9D8P7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gtf3c6Q9D8P7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Idnk-204ENSMUST00000226010 1898 ntBASIC19.01■□□□□ 0.63
Gtf3c6Q9D8P7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Gm5408-201ENSMUST00000197998 747 ntBASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Gm43859-201ENSMUST00000200075 1412 ntBASIC19■□□□□ 0.63
Gtf3c6Q9D8P7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.99■□□□□ 0.63
Gtf3c6Q9D8P7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf3c6Q9D8P7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf3c6Q9D8P7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Gtf3c6Q9D8P7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms