Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shmt2Q9CZN7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shmt2Q9CZN7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shmt2Q9CZN7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shmt2Q9CZN7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shmt2Q9CZN7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shmt2Q9CZN7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt2Q9CZN7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt2Q9CZN7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt2Q9CZN7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt2Q9CZN7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt2Q9CZN7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt2Q9CZN7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt2Q9CZN7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shmt2Q9CZN7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shmt2Q9CZN7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shmt2Q9CZN7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Shmt2Q9CZN7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Shmt2Q9CZN7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shmt2Q9CZN7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shmt2Q9CZN7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms