Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Gm6365-201ENSMUST00000054711 744 ntBASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc43Q9CR29 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Gm27405-201ENSMUST00000184201 112 ntBASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Fst-202ENSMUST00000223640 2612 ntBASIC19.87■□□□□ 0.77
Ccdc43Q9CR29 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.86■□□□□ 0.77
Ccdc43Q9CR29 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc43Q9CR29 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc43Q9CR29 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.83■□□□□ 0.77
Ccdc43Q9CR29 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc43Q9CR29 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.83■□□□□ 0.76
Ccdc43Q9CR29 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc43Q9CR29 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms