Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.49■□□□□ 0.39
Trim16Q99PP9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim16Q99PP9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.48■□□□□ 0.39
Trim16Q99PP9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.48■□□□□ 0.39
Trim16Q99PP9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim16Q99PP9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.47■□□□□ 0.39
Trim16Q99PP9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.47■□□□□ 0.39
Trim16Q99PP9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim16Q99PP9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.46■□□□□ 0.39
Trim16Q99PP9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.46■□□□□ 0.39
Trim16Q99PP9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim16Q99PP9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim16Q99PP9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim16Q99PP9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim16Q99PP9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim16Q99PP9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim16Q99PP9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim16Q99PP9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.44■□□□□ 0.38
Trim16Q99PP9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Trim16Q99PP9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms