Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga6Q91XY2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Gm23634-201ENSMUST00000175071 91 ntBASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga6Q91XY2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Gm18101-201ENSMUST00000215769 548 ntBASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga6Q91XY2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Gm10138-203ENSMUST00000206952 366 ntBASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga6Q91XY2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Gm33142-201ENSMUST00000193913 867 ntBASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga6Q91XY2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga6Q91XY2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Gm10013-201ENSMUST00000106074 672 ntBASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 AA414768-201ENSMUST00000121924 1257 ntBASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga6Q91XY2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms