Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Gm21814-202ENSMUST00000203277 873 ntBASIC17.67■□□□□ 0.42
Hbp1Q8R316 Timm23-208ENSMUST00000226683 750 ntBASIC17.67■□□□□ 0.42
Hbp1Q8R316 Odf3b-204ENSMUST00000227834 930 ntBASIC17.67■□□□□ 0.42
Hbp1Q8R316 Gm5417-201ENSMUST00000079706 384 ntBASIC17.67■□□□□ 0.42
Hbp1Q8R316 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.67■□□□□ 0.42
Hbp1Q8R316 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hbp1Q8R316 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Gm15565-201ENSMUST00000118890 427 ntBASIC17.66■□□□□ 0.42
Hbp1Q8R316 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.66■□□□□ 0.42
Hbp1Q8R316 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.66■□□□□ 0.42
Hbp1Q8R316 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Tgds-204ENSMUST00000228543 1594 ntBASIC17.65■□□□□ 0.42
Hbp1Q8R316 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hbp1Q8R316 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hbp1Q8R316 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hbp1Q8R316 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hbp1Q8R316 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hbp1Q8R316 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hbp1Q8R316 Gm10418-201ENSMUST00000100943 576 ntBASIC17.64■□□□□ 0.41
Hbp1Q8R316 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hbp1Q8R316 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.64■□□□□ 0.41
Hbp1Q8R316 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.64■□□□□ 0.41
Hbp1Q8R316 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hbp1Q8R316 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hbp1Q8R316 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hbp1Q8R316 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hbp1Q8R316 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hbp1Q8R316 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.63■□□□□ 0.41
Hbp1Q8R316 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.63■□□□□ 0.41
Hbp1Q8R316 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hbp1Q8R316 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.62■□□□□ 0.41
Hbp1Q8R316 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbp1Q8R316 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms