Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Ddx54Q8K4L0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx54Q8K4L0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx54Q8K4L0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx54Q8K4L0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx54Q8K4L0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx54Q8K4L0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Ddx54Q8K4L0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx54Q8K4L0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Gm24841-201ENSMUST00000158676 357 ntBASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Birc2-201ENSMUST00000054878 378 ntBASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx54Q8K4L0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx54Q8K4L0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx54Q8K4L0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx54Q8K4L0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx54Q8K4L0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx54Q8K4L0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx54Q8K4L0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx54Q8K4L0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Ddx54Q8K4L0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Gm13884-201ENSMUST00000118103 829 ntBASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Gm26039-201ENSMUST00000158152 144 ntBASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Mir8098-201ENSMUST00000184011 137 ntBASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Ddx54Q8K4L0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ddx54Q8K4L0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ddx54Q8K4L0 Mir770-201ENSMUST00000103252 94 ntBASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Gm3272-201ENSMUST00000181181 1229 ntBASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Gm10566-201ENSMUST00000086739 996 ntBASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx54Q8K4L0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms