Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf31Q8CCF0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Prpf31Q8CCF0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.56■□□□□ 0.72
Prpf31Q8CCF0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf31Q8CCF0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf31Q8CCF0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf31Q8CCF0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf31Q8CCF0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.54■□□□□ 0.72
Prpf31Q8CCF0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf31Q8CCF0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf31Q8CCF0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf31Q8CCF0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
Prpf31Q8CCF0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Gm12382-201ENSMUST00000122005 922 ntBASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf31Q8CCF0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Mir5122-201ENSMUST00000175004 89 ntBASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf31Q8CCF0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms