Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps53Q8CCB4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps53Q8CCB4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps53Q8CCB4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.78■□□□□ 0.92
Vps53Q8CCB4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps53Q8CCB4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps53Q8CCB4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps53Q8CCB4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps53Q8CCB4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps53Q8CCB4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps53Q8CCB4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Vps53Q8CCB4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vps53Q8CCB4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vps53Q8CCB4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vps53Q8CCB4 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Dio3-201ENSMUST00000097228 1449 ntBASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps53Q8CCB4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Gm13836-201ENSMUST00000121159 501 ntBASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vps53Q8CCB4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms