Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rft1Q8C3B8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rft1Q8C3B8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rft1Q8C3B8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Gm13146-201ENSMUST00000118508 780 ntBASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Gm7514-201ENSMUST00000209475 934 ntBASIC15.92■□□□□ 0.14
Rft1Q8C3B8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rft1Q8C3B8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Rft1Q8C3B8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.9■□□□□ 0.14
Rft1Q8C3B8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rft1Q8C3B8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms