Protein–RNA interactions for Protein: Q8C1M2

Znf428, Zinc finger protein 428, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf428Q8C1M2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Znf428Q8C1M2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Znf428Q8C1M2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Znf428Q8C1M2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.33■■□□□ 1.01
Znf428Q8C1M2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Znf428Q8C1M2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Znf428Q8C1M2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.32■■□□□ 1
Znf428Q8C1M2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.32■■□□□ 1
Znf428Q8C1M2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.32■■□□□ 1
Znf428Q8C1M2 Mir3081-201ENSMUST00000175305 84 ntBASIC21.32■■□□□ 1
Znf428Q8C1M2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.32■■□□□ 1
Znf428Q8C1M2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Znf428Q8C1M2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Znf428Q8C1M2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Znf428Q8C1M2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Znf428Q8C1M2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Znf428Q8C1M2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.31■■□□□ 1
Znf428Q8C1M2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf428Q8C1M2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.3■■□□□ 1
Znf428Q8C1M2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf428Q8C1M2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf428Q8C1M2 Gm7638-201ENSMUST00000121348 967 ntBASIC21.3■■□□□ 1
Znf428Q8C1M2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf428Q8C1M2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf428Q8C1M2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf428Q8C1M2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.3■■□□□ 1
Znf428Q8C1M2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Znf428Q8C1M2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.29■■□□□ 1
Znf428Q8C1M2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Znf428Q8C1M2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Gm43514-201ENSMUST00000198852 424 ntBASIC21.29■■□□□ 1
Znf428Q8C1M2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.29■■□□□ 1
Znf428Q8C1M2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.29■■□□□ 1
Znf428Q8C1M2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.29■■□□□ 1
Znf428Q8C1M2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Znf428Q8C1M2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Znf428Q8C1M2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.29■■□□□ 1
Znf428Q8C1M2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Gm9013-201ENSMUST00000132939 882 ntBASIC21.28■■□□□ 1
Znf428Q8C1M2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.28■■□□□ 1
Znf428Q8C1M2 Gm6443-201ENSMUST00000203599 874 ntBASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms