Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Gm9988-201ENSMUST00000069786 435 ntBASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc44a2Q8BY89 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Slc44a2Q8BY89 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Slc44a2Q8BY89 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc44a2Q8BY89 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc44a2Q8BY89 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc44a2Q8BY89 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.38■□□□□ 0.37
Slc44a2Q8BY89 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Gm15039-201ENSMUST00000118914 875 ntBASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc44a2Q8BY89 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc44a2Q8BY89 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc44a2Q8BY89 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc44a2Q8BY89 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc44a2Q8BY89 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Slc44a2Q8BY89 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms