Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Gm43017-201ENSMUST00000198296 752 ntBASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm11Q8BUV6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Gm13146-201ENSMUST00000118508 780 ntBASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm11Q8BUV6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm11Q8BUV6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm11Q8BUV6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm11Q8BUV6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.21■□□□□ 0.02
Lsm11Q8BUV6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lsm11Q8BUV6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Gm15823-201ENSMUST00000064305 670 ntBASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm11Q8BUV6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms