Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4Q8BQZ5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Gm26524-201ENSMUST00000192339 390 ntBASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4Q8BQZ5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4Q8BQZ5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cpsf4Q8BQZ5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpsf4Q8BQZ5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpsf4Q8BQZ5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpsf4Q8BQZ5 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.33■□□□□ 0.37
Cpsf4Q8BQZ5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpsf4Q8BQZ5 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf4Q8BQZ5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf4Q8BQZ5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf4Q8BQZ5 Gm12527-201ENSMUST00000117967 564 ntBASIC17.3■□□□□ 0.36
Cpsf4Q8BQZ5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.3■□□□□ 0.36
Cpsf4Q8BQZ5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf4Q8BQZ5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cpsf4Q8BQZ5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf4Q8BQZ5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms