Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcaf1Q8BNE1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Gm12382-201ENSMUST00000122005 922 ntBASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tcaf1Q8BNE1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tcaf1Q8BNE1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Gm6576-201ENSMUST00000169678 883 ntBASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcaf1Q8BNE1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Gm11643-201ENSMUST00000119578 864 ntBASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tcaf1Q8BNE1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Gm715-201ENSMUST00000117865 831 ntBASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.24■□□□□ 0.67
Tcaf1Q8BNE1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcaf1Q8BNE1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms