Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm27463-201ENSMUST00000183569 57 ntBASIC15.2■□□□□ 0.02
Smg1Q8BKX6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.2■□□□□ 0.02
Smg1Q8BKX6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.2■□□□□ 0.02
Smg1Q8BKX6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smg1Q8BKX6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Gm43347-201ENSMUST00000200226 580 ntBASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smg1Q8BKX6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Zfp783-201ENSMUST00000095946 670 ntBASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Fst-202ENSMUST00000223640 2612 ntBASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Mir8098-201ENSMUST00000184011 137 ntBASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smg1Q8BKX6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Gm28659-201ENSMUST00000188013 759 ntBASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smg1Q8BKX6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Mir6349-201ENSMUST00000184059 97 ntBASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smg1Q8BKX6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms