Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim6Q8BGE7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.02■□□□□ 0.63
Trim6Q8BGE7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim6Q8BGE7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim6Q8BGE7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19■□□□□ 0.63
Trim6Q8BGE7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19■□□□□ 0.63
Trim6Q8BGE7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim6Q8BGE7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim6Q8BGE7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim6Q8BGE7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19■□□□□ 0.63
Trim6Q8BGE7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19■□□□□ 0.63
Trim6Q8BGE7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Trim6Q8BGE7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim6Q8BGE7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim6Q8BGE7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim6Q8BGE7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim6Q8BGE7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim6Q8BGE7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim6Q8BGE7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim6Q8BGE7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim6Q8BGE7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim6Q8BGE7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms