Protein–RNA interactions for Protein: Q80UN9

Trit1, tRNA dimethylallyltransferase, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trit1Q80UN9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trit1Q80UN9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trit1Q80UN9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.85■□□□□ 0.61
Trit1Q80UN9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trit1Q80UN9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trit1Q80UN9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trit1Q80UN9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Gm18101-201ENSMUST00000215769 548 ntBASIC18.84■□□□□ 0.61
Trit1Q80UN9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trit1Q80UN9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trit1Q80UN9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trit1Q80UN9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trit1Q80UN9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trit1Q80UN9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trit1Q80UN9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.83■□□□□ 0.6
Trit1Q80UN9 Gm9103-201ENSMUST00000119371 405 ntBASIC18.83■□□□□ 0.6
Trit1Q80UN9 Gm25016-201ENSMUST00000158399 131 ntBASIC18.83■□□□□ 0.6
Trit1Q80UN9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.83■□□□□ 0.6
Trit1Q80UN9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.83■□□□□ 0.6
Trit1Q80UN9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trit1Q80UN9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trit1Q80UN9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trit1Q80UN9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.82■□□□□ 0.6
Trit1Q80UN9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trit1Q80UN9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trit1Q80UN9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.82■□□□□ 0.6
Trit1Q80UN9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trit1Q80UN9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trit1Q80UN9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trit1Q80UN9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trit1Q80UN9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.81■□□□□ 0.6
Trit1Q80UN9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trit1Q80UN9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Gm22697-201ENSMUST00000175194 63 ntBASIC18.81■□□□□ 0.6
Trit1Q80UN9 Gm38027-201ENSMUST00000192315 235 ntBASIC18.81■□□□□ 0.6
Trit1Q80UN9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trit1Q80UN9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.8■□□□□ 0.6
Trit1Q80UN9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.8■□□□□ 0.6
Trit1Q80UN9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trit1Q80UN9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.79■□□□□ 0.6
Trit1Q80UN9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trit1Q80UN9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Ank2-226ENSMUST00000189368 339 ntBASIC18.79■□□□□ 0.6
Trit1Q80UN9 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.79■□□□□ 0.6
Trit1Q80UN9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trit1Q80UN9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms