Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Usp8Q80U87 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp8Q80U87 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Usp8Q80U87 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Usp8Q80U87 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp8Q80U87 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp8Q80U87 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp8Q80U87 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.91■□□□□ 0.46
Usp8Q80U87 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp8Q80U87 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp8Q80U87 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp8Q80U87 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Usp8Q80U87 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp8Q80U87 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp8Q80U87 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Usp8Q80U87 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp8Q80U87 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp8Q80U87 Gm6420-201ENSMUST00000193885 723 ntBASIC17.9■□□□□ 0.46
Usp8Q80U87 Gm42642-201ENSMUST00000200683 355 ntBASIC17.9■□□□□ 0.46
Usp8Q80U87 Gm7514-201ENSMUST00000209475 934 ntBASIC17.9■□□□□ 0.46
Usp8Q80U87 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.9■□□□□ 0.46
Usp8Q80U87 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp8Q80U87 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp8Q80U87 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp8Q80U87 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.89■□□□□ 0.45
Usp8Q80U87 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.89■□□□□ 0.45
Usp8Q80U87 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp8Q80U87 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp8Q80U87 Nespas-201ENSMUST00000143738 1083 ntBASIC17.89■□□□□ 0.45
Usp8Q80U87 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp8Q80U87 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Usp8Q80U87 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp8Q80U87 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp8Q80U87 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp8Q80U87 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp8Q80U87 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp8Q80U87 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp8Q80U87 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Usp8Q80U87 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Usp8Q80U87 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Usp8Q80U87 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms