Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Golph3-205ENSMUST00000228671 2842 ntBASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh19Q80TF3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh19Q80TF3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh19Q80TF3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh19Q80TF3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh19Q80TF3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Gm37292-201ENSMUST00000192062 758 ntBASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdh19Q80TF3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdh19Q80TF3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh19Q80TF3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms