Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.57■□□□□ 0.72
Ush1gQ80T11 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.56■□□□□ 0.72
Ush1gQ80T11 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Gm18025-201ENSMUST00000221733 862 ntBASIC19.56■□□□□ 0.72
Ush1gQ80T11 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ush1gQ80T11 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ush1gQ80T11 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Timm23-208ENSMUST00000226683 750 ntBASIC19.55■□□□□ 0.72
Ush1gQ80T11 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ush1gQ80T11 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.55■□□□□ 0.72
Ush1gQ80T11 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.54■□□□□ 0.72
Ush1gQ80T11 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ush1gQ80T11 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ush1gQ80T11 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ush1gQ80T11 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ush1gQ80T11 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ush1gQ80T11 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ush1gQ80T11 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ush1gQ80T11 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ush1gQ80T11 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.52■□□□□ 0.71
Ush1gQ80T11 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Gm13559-201ENSMUST00000120476 863 ntBASIC19.51■□□□□ 0.71
Ush1gQ80T11 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Gm42545-201ENSMUST00000202755 922 ntBASIC19.51■□□□□ 0.71
Ush1gQ80T11 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.51■□□□□ 0.71
Ush1gQ80T11 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ush1gQ80T11 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ush1gQ80T11 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.49■□□□□ 0.71
Ush1gQ80T11 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ush1gQ80T11 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ush1gQ80T11 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ush1gQ80T11 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms