Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sdc3Q64519 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.15■□□□□ 0.34
Sdc3Q64519 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.15■□□□□ 0.34
Sdc3Q64519 Gm10252-201ENSMUST00000209541 832 ntBASIC17.15■□□□□ 0.34
Sdc3Q64519 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sdc3Q64519 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc3Q64519 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sdc3Q64519 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdc3Q64519 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.14■□□□□ 0.33
Sdc3Q64519 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdc3Q64519 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sdc3Q64519 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.14■□□□□ 0.33
Sdc3Q64519 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdc3Q64519 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sdc3Q64519 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sdc3Q64519 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc3Q64519 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc3Q64519 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc3Q64519 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc3Q64519 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc3Q64519 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc3Q64519 Gm13158-201ENSMUST00000122007 736 ntBASIC17.13■□□□□ 0.33
Sdc3Q64519 Gm18666-201ENSMUST00000190039 958 ntBASIC17.13■□□□□ 0.33
Sdc3Q64519 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc3Q64519 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.13■□□□□ 0.33
Sdc3Q64519 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc3Q64519 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.13■□□□□ 0.33
Sdc3Q64519 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Sdc3Q64519 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sdc3Q64519 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sdc3Q64519 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sdc3Q64519 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Gm10698-201ENSMUST00000182663 604 ntBASIC17.12■□□□□ 0.33
Sdc3Q64519 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.12■□□□□ 0.33
Sdc3Q64519 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.12■□□□□ 0.33
Sdc3Q64519 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sdc3Q64519 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sdc3Q64519 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.12■□□□□ 0.33
Sdc3Q64519 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc3Q64519 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sdc3Q64519 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sdc3Q64519 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.11■□□□□ 0.33
Sdc3Q64519 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.11■□□□□ 0.33
Sdc3Q64519 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sdc3Q64519 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Sdc3Q64519 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.11■□□□□ 0.33
Sdc3Q64519 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.11■□□□□ 0.33
Sdc3Q64519 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.11■□□□□ 0.33
Sdc3Q64519 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc3Q64519 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.11■□□□□ 0.33
Sdc3Q64519 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Sdc3Q64519 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.1■□□□□ 0.33
Sdc3Q64519 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.1■□□□□ 0.33
Sdc3Q64519 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sdc3Q64519 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.1■□□□□ 0.33
Sdc3Q64519 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms