Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VcanQ62059 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.86■□□□□ 0.29
VcanQ62059 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VcanQ62059 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VcanQ62059 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VcanQ62059 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
VcanQ62059 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
VcanQ62059 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.85■□□□□ 0.29
VcanQ62059 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.85■□□□□ 0.29
VcanQ62059 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.85■□□□□ 0.29
VcanQ62059 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VcanQ62059 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
VcanQ62059 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
VcanQ62059 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VcanQ62059 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.85■□□□□ 0.29
VcanQ62059 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VcanQ62059 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VcanQ62059 Gm43575-201ENSMUST00000196420 516 ntBASIC16.84■□□□□ 0.29
VcanQ62059 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VcanQ62059 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VcanQ62059 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VcanQ62059 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VcanQ62059 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VcanQ62059 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VcanQ62059 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VcanQ62059 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VcanQ62059 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VcanQ62059 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VcanQ62059 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VcanQ62059 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VcanQ62059 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
VcanQ62059 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.83■□□□□ 0.28
VcanQ62059 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VcanQ62059 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VcanQ62059 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VcanQ62059 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VcanQ62059 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VcanQ62059 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VcanQ62059 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VcanQ62059 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.83■□□□□ 0.28
VcanQ62059 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VcanQ62059 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VcanQ62059 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.82■□□□□ 0.28
VcanQ62059 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VcanQ62059 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VcanQ62059 Gm27389-201ENSMUST00000183622 195 ntBASIC16.82■□□□□ 0.28
VcanQ62059 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VcanQ62059 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VcanQ62059 Gm5186-201ENSMUST00000218781 920 ntBASIC16.82■□□□□ 0.28
VcanQ62059 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VcanQ62059 Gm13474-201ENSMUST00000122466 815 ntBASIC16.81■□□□□ 0.28
VcanQ62059 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.81■□□□□ 0.28
VcanQ62059 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VcanQ62059 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.8■□□□□ 0.28
VcanQ62059 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.8■□□□□ 0.28
VcanQ62059 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.8■□□□□ 0.28
VcanQ62059 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VcanQ62059 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.8■□□□□ 0.28
VcanQ62059 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VcanQ62059 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.79■□□□□ 0.28
VcanQ62059 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.79■□□□□ 0.28
VcanQ62059 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.79■□□□□ 0.28
VcanQ62059 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VcanQ62059 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms