Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rai1Q61818 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rai1Q61818 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.3■□□□□ 0.36
Rai1Q61818 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.3■□□□□ 0.36
Rai1Q61818 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rai1Q61818 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rai1Q61818 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.29■□□□□ 0.36
Rai1Q61818 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rai1Q61818 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rai1Q61818 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.29■□□□□ 0.36
Rai1Q61818 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Gm7791-201ENSMUST00000219066 539 ntBASIC17.29■□□□□ 0.36
Rai1Q61818 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rai1Q61818 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rai1Q61818 Notumos-201ENSMUST00000151998 2659 ntBASIC17.28■□□□□ 0.36
Rai1Q61818 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.28■□□□□ 0.36
Rai1Q61818 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rai1Q61818 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.28■□□□□ 0.36
Rai1Q61818 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rai1Q61818 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.27■□□□□ 0.36
Rai1Q61818 Gm29791-202ENSMUST00000207888 369 ntBASIC17.27■□□□□ 0.36
Rai1Q61818 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
Rai1Q61818 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Rai1Q61818 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rai1Q61818 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rai1Q61818 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rai1Q61818 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.27■□□□□ 0.36
Rai1Q61818 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rai1Q61818 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rai1Q61818 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rai1Q61818 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rai1Q61818 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rai1Q61818 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rai1Q61818 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.27■□□□□ 0.35
Rai1Q61818 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.27■□□□□ 0.35
Rai1Q61818 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rai1Q61818 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.27■□□□□ 0.35
Rai1Q61818 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rai1Q61818 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rai1Q61818 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rai1Q61818 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Rai1Q61818 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rai1Q61818 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rai1Q61818 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rai1Q61818 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rai1Q61818 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rai1Q61818 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rai1Q61818 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rai1Q61818 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rai1Q61818 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rai1Q61818 Mir1668-201ENSMUST00000184114 107 ntBASIC17.25■□□□□ 0.35
Rai1Q61818 Gm9731-201ENSMUST00000209480 747 ntBASIC17.25■□□□□ 0.35
Rai1Q61818 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rai1Q61818 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rai1Q61818 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rai1Q61818 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rai1Q61818 Gm7638-201ENSMUST00000121348 967 ntBASIC17.24■□□□□ 0.35
Rai1Q61818 Gm37025-201ENSMUST00000195159 829 ntBASIC17.24■□□□□ 0.35
Rai1Q61818 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rai1Q61818 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rai1Q61818 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.24■□□□□ 0.35
Rai1Q61818 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.24■□□□□ 0.35
Rai1Q61818 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rai1Q61818 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rai1Q61818 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rai1Q61818 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rai1Q61818 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rai1Q61818 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms