Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.06■□□□□ 0.32
Nr1h4Q60641 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1h4Q60641 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nr1h4Q60641 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h4Q60641 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Gm9988-201ENSMUST00000069786 435 ntBASIC17.04■□□□□ 0.32
Nr1h4Q60641 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.04■□□□□ 0.32
Nr1h4Q60641 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h4Q60641 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h4Q60641 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h4Q60641 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Nr1h4Q60641 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1h4Q60641 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.02■□□□□ 0.31
Nr1h4Q60641 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Reep4-203ENSMUST00000226563 1444 ntBASIC17.01■□□□□ 0.31
Nr1h4Q60641 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h4Q60641 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h4Q60641 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nr1h4Q60641 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h4Q60641 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1h4Q60641 Gm22325-201ENSMUST00000158904 308 ntBASIC17■□□□□ 0.31
Nr1h4Q60641 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17■□□□□ 0.31
Nr1h4Q60641 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms