Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Rab3c-203ENSMUST00000224180 967 ntBASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syne3Q4FZC9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.97■□□□□ 0.63
Syne3Q4FZC9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Syne3Q4FZC9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syne3Q4FZC9 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.97■□□□□ 0.63
Syne3Q4FZC9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syne3Q4FZC9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.97■□□□□ 0.63
Syne3Q4FZC9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.97■□□□□ 0.63
Syne3Q4FZC9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Syne3Q4FZC9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syne3Q4FZC9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Gm26524-201ENSMUST00000192339 390 ntBASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne3Q4FZC9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Syne3Q4FZC9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne3Q4FZC9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.93■□□□□ 0.62
Syne3Q4FZC9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne3Q4FZC9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Syne3Q4FZC9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms