Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
BC051142Q3V0M8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
BC051142Q3V0M8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
BC051142Q3V0M8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BC051142Q3V0M8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BC051142Q3V0M8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.08■□□□□ 0.64
BC051142Q3V0M8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BC051142Q3V0M8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC051142Q3V0M8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Gm44549-201ENSMUST00000208351 577 ntBASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BC051142Q3V0M8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC051142Q3V0M8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC051142Q3V0M8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC051142Q3V0M8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC051142Q3V0M8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC051142Q3V0M8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC051142Q3V0M8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC051142Q3V0M8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.03■□□□□ 0.64
BC051142Q3V0M8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.03■□□□□ 0.64
BC051142Q3V0M8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BC051142Q3V0M8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms