Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Gm9988-201ENSMUST00000069786 435 ntBASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shisa3Q3UPR0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Shisa3Q3UPR0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Shisa3Q3UPR0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Gm42778-201ENSMUST00000199644 553 ntBASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Gm42642-201ENSMUST00000200683 355 ntBASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa3Q3UPR0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa3Q3UPR0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.38■□□□□ 0.05
Shisa3Q3UPR0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa3Q3UPR0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa3Q3UPR0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa3Q3UPR0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms