Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cks1brtQ3UNC9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cks1brtQ3UNC9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cks1brtQ3UNC9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cks1brtQ3UNC9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cks1brtQ3UNC9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1brtQ3UNC9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Gm43530-201ENSMUST00000195920 274 ntBASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1brtQ3UNC9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1brtQ3UNC9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1brtQ3UNC9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms