Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Gm13836-201ENSMUST00000121159 501 ntBASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smcr8Q3UMB5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smcr8Q3UMB5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.18■□□□□ 0.66
Smcr8Q3UMB5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Gm5417-201ENSMUST00000079706 384 ntBASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smcr8Q3UMB5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Gm37292-201ENSMUST00000192062 758 ntBASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.16■□□□□ 0.66
Smcr8Q3UMB5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Mir6349-201ENSMUST00000184059 97 ntBASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms