Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rpl39P62892 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.77□□□□□ -0.37
Rpl39P62892 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpl39P62892 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rpl39P62892 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39P62892 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.76□□□□□ -0.37
Rpl39P62892 Smad6-203ENSMUST00000179458 273 ntBASIC12.76□□□□□ -0.37
Rpl39P62892 Gm8969-201ENSMUST00000199694 526 ntBASIC12.76□□□□□ -0.37
Rpl39P62892 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rpl39P62892 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rpl39P62892 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Rpl39P62892 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39P62892 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpl39P62892 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.75□□□□□ -0.37
Rpl39P62892 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rpl39P62892 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.75□□□□□ -0.37
Rpl39P62892 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Rpl39P62892 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Rpl39P62892 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.75□□□□□ -0.37
Rpl39P62892 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Rpl39P62892 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rpl39P62892 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl39P62892 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Rpl39P62892 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.74□□□□□ -0.37
Rpl39P62892 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rpl39P62892 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rpl39P62892 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Rpl39P62892 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.74□□□□□ -0.37
Rpl39P62892 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rpl39P62892 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rpl39P62892 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rpl39P62892 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.74□□□□□ -0.37
Rpl39P62892 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.74□□□□□ -0.37
Rpl39P62892 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl39P62892 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl39P62892 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl39P62892 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl39P62892 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl39P62892 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl39P62892 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl39P62892 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl39P62892 Gm38205-201ENSMUST00000192243 258 ntBASIC12.73□□□□□ -0.37
Rpl39P62892 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.73□□□□□ -0.37
Rpl39P62892 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms