Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh11P55288 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh11P55288 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh11P55288 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Cdh11P55288 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.28■□□□□ 0.2
Cdh11P55288 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdh11P55288 Gm27011-201ENSMUST00000182352 972 ntBASIC16.28■□□□□ 0.2
Cdh11P55288 Gm6420-201ENSMUST00000193885 723 ntBASIC16.28■□□□□ 0.2
Cdh11P55288 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cdh11P55288 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Cdh11P55288 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh11P55288 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh11P55288 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh11P55288 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh11P55288 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Nespas-201ENSMUST00000143738 1083 ntBASIC16.27■□□□□ 0.2
Cdh11P55288 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.27■□□□□ 0.2
Cdh11P55288 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh11P55288 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh11P55288 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh11P55288 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh11P55288 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh11P55288 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh11P55288 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.26■□□□□ 0.19
Cdh11P55288 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cdh11P55288 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh11P55288 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cdh11P55288 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.26■□□□□ 0.19
Cdh11P55288 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cdh11P55288 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdh11P55288 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.26■□□□□ 0.19
Cdh11P55288 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cdh11P55288 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Cdh11P55288 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh11P55288 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh11P55288 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.25■□□□□ 0.19
Cdh11P55288 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Gm13534-201ENSMUST00000121169 513 ntBASIC16.25■□□□□ 0.19
Cdh11P55288 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.25■□□□□ 0.19
Cdh11P55288 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.25■□□□□ 0.19
Cdh11P55288 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh11P55288 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cdh11P55288 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh11P55288 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.24■□□□□ 0.19
Cdh11P55288 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.24■□□□□ 0.19
Cdh11P55288 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms