Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdh5P55284 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdh5P55284 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdh5P55284 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdh5P55284 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdh5P55284 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh5P55284 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdh5P55284 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.39■□□□□ 0.37
Cdh5P55284 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh5P55284 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.39■□□□□ 0.37
Cdh5P55284 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.39■□□□□ 0.37
Cdh5P55284 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.39■□□□□ 0.37
Cdh5P55284 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh5P55284 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh5P55284 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh5P55284 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdh5P55284 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdh5P55284 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.38■□□□□ 0.37
Cdh5P55284 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.38■□□□□ 0.37
Cdh5P55284 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdh5P55284 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.38■□□□□ 0.37
Cdh5P55284 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh5P55284 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdh5P55284 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cdh5P55284 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Cdh5P55284 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdh5P55284 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Cdh5P55284 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Cdh5P55284 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cdh5P55284 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cdh5P55284 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh5P55284 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.36■□□□□ 0.37
Cdh5P55284 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Cdh5P55284 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.36■□□□□ 0.37
Cdh5P55284 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.36■□□□□ 0.37
Cdh5P55284 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdh5P55284 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdh5P55284 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.36■□□□□ 0.37
Cdh5P55284 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh5P55284 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh5P55284 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cdh5P55284 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.35■□□□□ 0.37
Cdh5P55284 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh5P55284 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdh5P55284 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh5P55284 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh5P55284 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh5P55284 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh5P55284 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdh5P55284 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh5P55284 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.34■□□□□ 0.37
Cdh5P55284 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdh5P55284 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms