Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Fen1P39749 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Fen1P39749 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.99■□□□□ 0.47
Fen1P39749 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.99■□□□□ 0.47
Fen1P39749 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Fen1P39749 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Fen1P39749 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Fen1P39749 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.98■□□□□ 0.47
Fen1P39749 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Fen1P39749 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.98■□□□□ 0.47
Fen1P39749 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fen1P39749 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Fen1P39749 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Fen1P39749 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.97■□□□□ 0.47
Fen1P39749 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fen1P39749 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.96■□□□□ 0.47
Fen1P39749 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.96■□□□□ 0.47
Fen1P39749 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.96■□□□□ 0.47
Fen1P39749 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.96■□□□□ 0.47
Fen1P39749 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Fen1P39749 Gm8495-201ENSMUST00000188740 694 ntBASIC17.96■□□□□ 0.47
Fen1P39749 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.96■□□□□ 0.47
Fen1P39749 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.96■□□□□ 0.47
Fen1P39749 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Fen1P39749 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Fen1P39749 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.96■□□□□ 0.47
Fen1P39749 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Fen1P39749 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Fen1P39749 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Fen1P39749 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.96■□□□□ 0.47
Fen1P39749 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Fen1P39749 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Fen1P39749 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Fen1P39749 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Fen1P39749 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Gm26833-201ENSMUST00000180899 440 ntBASIC17.95■□□□□ 0.46
Fen1P39749 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.95■□□□□ 0.46
Fen1P39749 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.95■□□□□ 0.46
Fen1P39749 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Fen1P39749 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Fen1P39749 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fen1P39749 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.94■□□□□ 0.46
Fen1P39749 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms