Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm13158-201ENSMUST00000122007 736 ntBASIC17.1■□□□□ 0.33
Cdh4P39038 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh4P39038 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh4P39038 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.09■□□□□ 0.33
Cdh4P39038 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh4P39038 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.09■□□□□ 0.33
Cdh4P39038 Gm8520-201ENSMUST00000186517 868 ntBASIC17.09■□□□□ 0.33
Cdh4P39038 Gm18666-201ENSMUST00000190039 958 ntBASIC17.09■□□□□ 0.33
Cdh4P39038 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.09■□□□□ 0.33
Cdh4P39038 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cdh4P39038 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh4P39038 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdh4P39038 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh4P39038 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh4P39038 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Cdh4P39038 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh4P39038 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.08■□□□□ 0.33
Cdh4P39038 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh4P39038 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Cdh4P39038 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh4P39038 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh4P39038 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.33
Cdh4P39038 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Gm13168-201ENSMUST00000121771 632 ntBASIC17.08■□□□□ 0.32
Cdh4P39038 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Cdh4P39038 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh4P39038 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.07■□□□□ 0.32
Cdh4P39038 Mtag2-201ENSMUST00000058665 714 ntBASIC17.07■□□□□ 0.32
Cdh4P39038 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdh4P39038 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdh4P39038 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cdh4P39038 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh4P39038 Tgds-204ENSMUST00000228543 1594 ntBASIC17.06■□□□□ 0.32
Cdh4P39038 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdh4P39038 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cdh4P39038 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh4P39038 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh4P39038 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh4P39038 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdh4P39038 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh4P39038 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.06■□□□□ 0.32
Cdh4P39038 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh4P39038 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh4P39038 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdh4P39038 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh4P39038 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh4P39038 Gm5643-201ENSMUST00000117081 966 ntBASIC17.05■□□□□ 0.32
Cdh4P39038 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.05■□□□□ 0.32
Cdh4P39038 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cdh4P39038 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh4P39038 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cdh4P39038 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh4P39038 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh4P39038 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms