Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Trmt13-210ENSMUST00000198454 880 ntBASIC16.55■□□□□ 0.24
Foxa1P35582 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Foxa1P35582 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.54■□□□□ 0.24
Foxa1P35582 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Gm10653-202ENSMUST00000139570 835 ntBASIC16.54■□□□□ 0.24
Foxa1P35582 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.54■□□□□ 0.24
Foxa1P35582 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Foxa1P35582 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.54■□□□□ 0.24
Foxa1P35582 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxa1P35582 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Foxa1P35582 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.53■□□□□ 0.24
Foxa1P35582 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.53■□□□□ 0.24
Foxa1P35582 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.53■□□□□ 0.24
Foxa1P35582 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxa1P35582 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.52■□□□□ 0.24
Foxa1P35582 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.52■□□□□ 0.24
Foxa1P35582 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.52■□□□□ 0.24
Foxa1P35582 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Foxa1P35582 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Foxa1P35582 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.52■□□□□ 0.24
Foxa1P35582 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.52■□□□□ 0.24
Foxa1P35582 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Foxa1P35582 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Foxa1P35582 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Foxa1P35582 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.51■□□□□ 0.23
Foxa1P35582 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Foxa1P35582 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Foxa1P35582 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxa1P35582 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Foxa1P35582 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Foxa1P35582 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Foxa1P35582 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.5■□□□□ 0.23
Foxa1P35582 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.5■□□□□ 0.23
Foxa1P35582 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.5■□□□□ 0.23
Foxa1P35582 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.5■□□□□ 0.23
Foxa1P35582 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.5■□□□□ 0.23
Foxa1P35582 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Foxa1P35582 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms