Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.19■□□□□ 0.18
Cd40P27512 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Gm10418-201ENSMUST00000100943 576 ntBASIC16.19■□□□□ 0.18
Cd40P27512 Mir2861-201ENSMUST00000175539 82 ntBASIC16.19■□□□□ 0.18
Cd40P27512 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cd40P27512 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.18■□□□□ 0.18
Cd40P27512 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
Cd40P27512 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.18■□□□□ 0.18
Cd40P27512 Gm18666-201ENSMUST00000190039 958 ntBASIC16.18■□□□□ 0.18
Cd40P27512 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.18■□□□□ 0.18
Cd40P27512 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.18■□□□□ 0.18
Cd40P27512 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd40P27512 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cd40P27512 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cd40P27512 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Gm15375-201ENSMUST00000119510 849 ntBASIC16.17■□□□□ 0.18
Cd40P27512 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.17■□□□□ 0.18
Cd40P27512 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.17■□□□□ 0.18
Cd40P27512 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd40P27512 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cd40P27512 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cd40P27512 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.16■□□□□ 0.18
Cd40P27512 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cd40P27512 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cd40P27512 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cd40P27512 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Cd40P27512 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.16■□□□□ 0.18
Cd40P27512 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.16■□□□□ 0.18
Cd40P27512 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd40P27512 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cd40P27512 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Gm20760-201ENSMUST00000179197 648 ntBASIC16.15■□□□□ 0.18
Cd40P27512 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.15■□□□□ 0.18
Cd40P27512 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.15■□□□□ 0.18
Cd40P27512 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cd40P27512 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.15■□□□□ 0.18
Cd40P27512 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd40P27512 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cd40P27512 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cd40P27512 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.14■□□□□ 0.17
Cd40P27512 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.14■□□□□ 0.17
Cd40P27512 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Cd40P27512 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms