Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Gm44549-201ENSMUST00000208351 577 ntBASIC19.46■□□□□ 0.71
Chmp6P0C0A3 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.46■□□□□ 0.71
Chmp6P0C0A3 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chmp6P0C0A3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Gm22325-201ENSMUST00000158904 308 ntBASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Chmp6P0C0A3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp6P0C0A3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Gm12896-201ENSMUST00000118430 226 ntBASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Gm2559-201ENSMUST00000201323 363 ntBASIC19.42■□□□□ 0.7
Chmp6P0C0A3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp6P0C0A3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp6P0C0A3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Gm2399-201ENSMUST00000104944 225 ntBASIC19.4■□□□□ 0.7
Chmp6P0C0A3 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp6P0C0A3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms