Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.12■□□□□ 0.33
Hcn1O88704 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Gm5408-201ENSMUST00000197998 747 ntBASIC17.11■□□□□ 0.33
Hcn1O88704 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.11■□□□□ 0.33
Hcn1O88704 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Hcn1O88704 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcn1O88704 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hcn1O88704 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.1■□□□□ 0.33
Hcn1O88704 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.1■□□□□ 0.33
Hcn1O88704 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hcn1O88704 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.1■□□□□ 0.33
Hcn1O88704 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hcn1O88704 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hcn1O88704 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcn1O88704 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.09■□□□□ 0.33
Hcn1O88704 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.09■□□□□ 0.33
Hcn1O88704 Gm4968-201ENSMUST00000071458 858 ntBASIC17.09■□□□□ 0.33
Hcn1O88704 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.09■□□□□ 0.33
Hcn1O88704 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.09■□□□□ 0.33
Hcn1O88704 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Hcn1O88704 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Hcn1O88704 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcn1O88704 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcn1O88704 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcn1O88704 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcn1O88704 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Hcn1O88704 Gm26524-201ENSMUST00000192339 390 ntBASIC17.08■□□□□ 0.32
Hcn1O88704 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcn1O88704 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.08■□□□□ 0.32
Hcn1O88704 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hcn1O88704 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.07■□□□□ 0.32
Hcn1O88704 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Hcn1O88704 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcn1O88704 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Hcn1O88704 Gm12441-201ENSMUST00000121806 588 ntBASIC17.06■□□□□ 0.32
Hcn1O88704 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.06■□□□□ 0.32
Hcn1O88704 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hcn1O88704 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 139.8 ms