Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdh16O88338 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.52■□□□□ 0.4
Cdh16O88338 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.52■□□□□ 0.4
Cdh16O88338 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cdh16O88338 Gm6139-201ENSMUST00000079261 882 ntBASIC17.52■□□□□ 0.4
Cdh16O88338 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh16O88338 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdh16O88338 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh16O88338 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh16O88338 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh16O88338 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.51■□□□□ 0.39
Cdh16O88338 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Gm45417-201ENSMUST00000209533 758 ntBASIC17.51■□□□□ 0.39
Cdh16O88338 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cdh16O88338 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.51■□□□□ 0.39
Cdh16O88338 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh16O88338 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
Cdh16O88338 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.5■□□□□ 0.39
Cdh16O88338 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh16O88338 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdh16O88338 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cdh16O88338 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cdh16O88338 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdh16O88338 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh16O88338 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdh16O88338 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdh16O88338 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdh16O88338 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdh16O88338 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdh16O88338 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Cdh16O88338 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh16O88338 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cdh16O88338 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cdh16O88338 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cdh16O88338 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.47■□□□□ 0.39
Cdh16O88338 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Cdh16O88338 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdh16O88338 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cdh16O88338 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms