Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.88□□□□□ -0.03
Pfdn2O70591 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.88□□□□□ -0.03
Pfdn2O70591 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Gm13241-201ENSMUST00000094493 780 ntBASIC14.88□□□□□ -0.03
Pfdn2O70591 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pfdn2O70591 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pfdn2O70591 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.87□□□□□ -0.03
Pfdn2O70591 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.87□□□□□ -0.03
Pfdn2O70591 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Gm43137-201ENSMUST00000198052 594 ntBASIC14.87□□□□□ -0.03
Pfdn2O70591 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pfdn2O70591 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Pfdn2O70591 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.87□□□□□ -0.03
Pfdn2O70591 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pfdn2O70591 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pfdn2O70591 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.86□□□□□ -0.03
Pfdn2O70591 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.86□□□□□ -0.03
Pfdn2O70591 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.86□□□□□ -0.03
Pfdn2O70591 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pfdn2O70591 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pfdn2O70591 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.85□□□□□ -0.03
Pfdn2O70591 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.85□□□□□ -0.03
Pfdn2O70591 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pfdn2O70591 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Pfdn2O70591 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pfdn2O70591 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn2O70591 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.84□□□□□ -0.03
Pfdn2O70591 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn2O70591 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn2O70591 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn2O70591 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.83□□□□□ -0.04
Pfdn2O70591 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.83□□□□□ -0.04
Pfdn2O70591 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms