Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Banf1O54962 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Banf1O54962 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Banf1O54962 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Banf1O54962 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Banf1O54962 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Banf1O54962 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.18■□□□□ 0.5
Banf1O54962 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Idnk-204ENSMUST00000226010 1898 ntBASIC18.18■□□□□ 0.5
Banf1O54962 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Banf1O54962 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Banf1O54962 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Banf1O54962 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.17■□□□□ 0.5
Banf1O54962 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Banf1O54962 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.16■□□□□ 0.5
Banf1O54962 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Banf1O54962 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.16■□□□□ 0.5
Banf1O54962 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.16■□□□□ 0.5
Banf1O54962 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Banf1O54962 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Banf1O54962 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Banf1O54962 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Banf1O54962 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Banf1O54962 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Banf1O54962 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Banf1O54962 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.15■□□□□ 0.5
Banf1O54962 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.15■□□□□ 0.5
Banf1O54962 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Banf1O54962 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Banf1O54962 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.15■□□□□ 0.5
Banf1O54962 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Banf1O54962 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Banf1O54962 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Banf1O54962 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Banf1O54962 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Banf1O54962 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.14■□□□□ 0.49
Banf1O54962 Gm42642-201ENSMUST00000200683 355 ntBASIC18.14■□□□□ 0.49
Banf1O54962 Gm18671-201ENSMUST00000214826 683 ntBASIC18.14■□□□□ 0.49
Banf1O54962 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.14■□□□□ 0.49
Banf1O54962 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Banf1O54962 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.14■□□□□ 0.49
Banf1O54962 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Banf1O54962 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Banf1O54962 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.13■□□□□ 0.49
Banf1O54962 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms