Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.73□□□□□ -0.05
Brs3O54798 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Gm11249-201ENSMUST00000117071 859 ntBASIC14.73□□□□□ -0.05
Brs3O54798 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.73□□□□□ -0.05
Brs3O54798 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Brs3O54798 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Brs3O54798 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.73□□□□□ -0.05
Brs3O54798 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.73□□□□□ -0.05
Brs3O54798 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Brs3O54798 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Brs3O54798 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brs3O54798 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Brs3O54798 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Gm5643-201ENSMUST00000117081 966 ntBASIC14.72□□□□□ -0.05
Brs3O54798 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Brs3O54798 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.72□□□□□ -0.05
Brs3O54798 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.72□□□□□ -0.05
Brs3O54798 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brs3O54798 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Brs3O54798 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.71□□□□□ -0.05
Brs3O54798 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Brs3O54798 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.71□□□□□ -0.05
Brs3O54798 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Brs3O54798 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.71□□□□□ -0.05
Brs3O54798 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.71□□□□□ -0.05
Brs3O54798 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
Brs3O54798 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.71□□□□□ -0.05
Brs3O54798 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.71□□□□□ -0.05
Brs3O54798 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.71□□□□□ -0.05
Brs3O54798 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Brs3O54798 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brs3O54798 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.71□□□□□ -0.06
Brs3O54798 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brs3O54798 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
Brs3O54798 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brs3O54798 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.71□□□□□ -0.06
Brs3O54798 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brs3O54798 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Gm11927-201ENSMUST00000118472 759 ntBASIC14.7□□□□□ -0.06
Brs3O54798 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Brs3O54798 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brs3O54798 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brs3O54798 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brs3O54798 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brs3O54798 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brs3O54798 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brs3O54798 Gm15378-201ENSMUST00000121894 207 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms