Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh1F7BJK1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh1F7BJK1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Gm22325-201ENSMUST00000158904 308 ntBASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Reep4-203ENSMUST00000226563 1444 ntBASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Idnk-204ENSMUST00000226010 1898 ntBASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh1F7BJK1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.09■□□□□ 0.17
Pcdh1F7BJK1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh1F7BJK1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh1F7BJK1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh1F7BJK1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh1F7BJK1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh1F7BJK1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh1F7BJK1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh1F7BJK1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh1F7BJK1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh1F7BJK1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms