Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Gm3880A0A1B0GSB3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Gm3880A0A1B0GSB3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Gm3880A0A1B0GSB3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Gm3880A0A1B0GSB3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Gm3880A0A1B0GSB3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Gm43672-201ENSMUST00000199072 1731 ntBASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 AC153911.1-201ENSMUST00000220378 758 ntBASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Gm3880A0A1B0GSB3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Gm43598-201ENSMUST00000202482 2479 ntBASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 AC124603.1-201ENSMUST00000223843 308 ntBASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Gm20100-201ENSMUST00000209418 2272 ntBASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Gm3880A0A1B0GSB3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Gm3880A0A1B0GSB3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Gm3880A0A1B0GSB3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms