Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Idnk-204ENSMUST00000226010 1898 ntBASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Gm5580A0A0N4SVP8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5580A0A0N4SVP8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5580A0A0N4SVP8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5580A0A0N4SVP8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Gm5580A0A0N4SVP8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5580A0A0N4SVP8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5580A0A0N4SVP8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5580A0A0N4SVP8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5580A0A0N4SVP8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5580A0A0N4SVP8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Gm7514-201ENSMUST00000209475 934 ntBASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5580A0A0N4SVP8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5580A0A0N4SVP8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Gm10033-202ENSMUST00000211874 928 ntBASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5580A0A0N4SVP8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms